Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003376annotation not available (171 aa)    
Predicted Functional Partners:
CCT3
Chaperonin containing TCP1 subunit 3.
   
 0.999
CCT2
Chaperonin containing TCP1 subunit 2.
   
 0.999
CCT8
Chaperonin containing TCP1 subunit 8.
   
 0.999
CCT6B
Chaperonin containing TCP1 subunit 6B.
   
 0.999
CCT4
Chaperonin containing TCP1 subunit 4.
   
 0.999
CCT6A
Chaperonin containing TCP1 subunit 6A.
   
 0.999
ENSCAPP00000000754
annotation not available
   
 0.998
ENSCAPP00000005325
annotation not available
   
 0.998
ENSCAPP00000013556
annotation not available
   
 0.998
ENSCAPP00000014670
annotation not available
   
 0.998
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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