STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat domain 29. (419 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
   
 
 0.711
GNAI1
G protein subunit alpha i1.
   
 0.675
GNAI3
G protein subunit alpha i3.
   
 0.675
GNA13
G protein subunit alpha 13.
   
 0.675
GNA12
G protein subunit alpha 12.
   
 0.675
ENSCAPP00000011373
annotation not available
   
 0.675
ENSCAPP00000014622
annotation not available
   
 0.675
ENSCAPP00000015528
annotation not available
   
 0.675
GNAT3
G protein subunit alpha transducin 3.
   
 0.675
GNAT1
G protein subunit alpha transducin 1.
   
 0.675
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.