STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat domain 29. (419 aa)    
Predicted Functional Partners:
DNAH1
Dynein axonemal heavy chain 1.
   
 
 0.979
WDR63
WD repeat domain 63.
   
 
 0.969
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.967
CFAP58
Cilia and flagella associated protein 58.
   
 
 0.962
ENSCAPP00000010765
annotation not available
   
 
 0.951
RIBC2
RIB43A domain with coiled-coils 2.
   
 
 0.945
DNAH6
Dynein axonemal heavy chain 6.
   
 
 0.942
CFAP44
Cilia and flagella associated protein 44.
   
 
 0.938
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.930
CFAP70
Cilia and flagella associated protein 70.
   
 
 0.930
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.