STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003382annotation not available (164 aa)    
Predicted Functional Partners:
ENSCAPP00000000068
annotation not available
 
 
 0.885
ENSCAPP00000009203
annotation not available
  
 0.879
ENSCAPP00000008712
annotation not available
  
 0.789
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
    
  0.778
ENSCAPP00000003581
annotation not available
    
  0.774
JCHAIN
Joining chain of multimeric IgA and IgM.
   
 0.760
ENSCAPP00000016316
annotation not available
    
 0.748
ENSCAPP00000018659
annotation not available
    
  0.720
ENSCAPP00000008480
annotation not available
   
 0.714
VPREB3
V-set pre-B cell surrogate light chain 3.
   
 0.710
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.