Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRABD2BTraB domain containing 2B. (481 aa)    
Predicted Functional Partners:
SLC5A9
Solute carrier family 5 member 9.
      
 0.758
ENSCAPP00000012099
annotation not available
      
 0.686
ENSCAPP00000002072
annotation not available
      
 0.642
NKD1
NKD inhibitor of WNT signaling pathway 1.
      
 0.626
IGSF21
Immunoglobin superfamily member 21.
      
 0.569
INPPL1
Inositol polyphosphate phosphatase like 1.
      
 0.566
WNT5A
Wnt family member 5A.
    
 
 0.564
SPTB
Spectrin beta, erythrocytic.
      
 0.528
ARID5B
AT-rich interaction domain 5B.
      
 0.521
JADE1
Jade family PHD finger 1.
      
 0.518
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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