Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS4Transmembrane serine protease 4. (534 aa)    
Predicted Functional Partners:
ENSCAPP00000015161
annotation not available
   
 0.937
ENSCAPP00000016488
annotation not available
   
 0.937
TMPRSS11F
Transmembrane serine protease 11F.
  
 
0.930
TMPRSS13
Transmembrane serine protease 13.
    
 0.797
F11
Coagulation factor XI.
  
 
0.769
KLKB1
Kallikrein B1.
  
 
0.767
PRSS8
Serine protease 8.
   
 0.748
ACR
Acrosin.
    
 0.734
ENSCAPP00000007433
annotation not available
    
 0.734
TMPRSS12
Transmembrane serine protease 12.
    
 0.734
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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