RAB25 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RAB25

RAB25, member RAS oncogene family. (172 aa)

Predicted Functional Partners:

RAB11FIP2

0.972

PI4KB

0.926

ITSN2

0.919

ENSCAPP00000016117

0.916

RAB11FIP4

0.911

ENSCAPP00000006004

0.905

ENSCAPP00000006827

0.868

ENSCAPP00000001732

0.861

RAB3IL1

0.861

ITSN1

0.851

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001732	ENSCAPP00000006827	ENSCAPP00000001732	ENSCAPP00000006827	annotation not available	annotation not available	0.655
ENSCAPP00000001732	ENSCAPP00000016117	ENSCAPP00000001732	ENSCAPP00000016117	annotation not available	annotation not available	0.963
ENSCAPP00000001732	RAB11FIP4	ENSCAPP00000001732	ENSCAPP00000001569	annotation not available	RAB11 family interacting protein 4.	0.784
ENSCAPP00000001732	RAB25	ENSCAPP00000001732	ENSCAPP00000003390	annotation not available	RAB25, member RAS oncogene family.	0.861
ENSCAPP00000001732	RAB3IL1	ENSCAPP00000001732	ENSCAPP00000017625	annotation not available	RAB3A interacting protein like 1.	0.769
ENSCAPP00000006004	ENSCAPP00000006827	ENSCAPP00000006004	ENSCAPP00000006827	annotation not available	annotation not available	0.813
ENSCAPP00000006004	ENSCAPP00000016117	ENSCAPP00000006004	ENSCAPP00000016117	annotation not available	annotation not available	0.595
ENSCAPP00000006004	RAB11FIP2	ENSCAPP00000006004	ENSCAPP00000015029	annotation not available	RAB11 family interacting protein 2.	0.841
ENSCAPP00000006004	RAB11FIP4	ENSCAPP00000006004	ENSCAPP00000001569	annotation not available	RAB11 family interacting protein 4.	0.597
ENSCAPP00000006004	RAB25	ENSCAPP00000006004	ENSCAPP00000003390	annotation not available	RAB25, member RAS oncogene family.	0.905
ENSCAPP00000006827	ENSCAPP00000001732	ENSCAPP00000006827	ENSCAPP00000001732	annotation not available	annotation not available	0.655
ENSCAPP00000006827	ENSCAPP00000006004	ENSCAPP00000006827	ENSCAPP00000006004	annotation not available	annotation not available	0.813
ENSCAPP00000006827	RAB11FIP2	ENSCAPP00000006827	ENSCAPP00000015029	annotation not available	RAB11 family interacting protein 2.	0.913
ENSCAPP00000006827	RAB25	ENSCAPP00000006827	ENSCAPP00000003390	annotation not available	RAB25, member RAS oncogene family.	0.868
ENSCAPP00000006827	RAB3IL1	ENSCAPP00000006827	ENSCAPP00000017625	annotation not available	RAB3A interacting protein like 1.	0.649
ENSCAPP00000016117	ENSCAPP00000001732	ENSCAPP00000016117	ENSCAPP00000001732	annotation not available	annotation not available	0.963
ENSCAPP00000016117	ENSCAPP00000006004	ENSCAPP00000016117	ENSCAPP00000006004	annotation not available	annotation not available	0.595
ENSCAPP00000016117	PI4KB	ENSCAPP00000016117	ENSCAPP00000017999	annotation not available	Phosphatidylinositol 4-kinase beta.	0.868
ENSCAPP00000016117	RAB11FIP2	ENSCAPP00000016117	ENSCAPP00000015029	annotation not available	RAB11 family interacting protein 2.	0.604
ENSCAPP00000016117	RAB11FIP4	ENSCAPP00000016117	ENSCAPP00000001569	annotation not available	RAB11 family interacting protein 4.	0.945