Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FLOT1Flotillin 1. (404 aa)    
Predicted Functional Partners:
FLOT2
Flotillin 2.
   
 0.999
SORBS1
Sorbin and SH3 domain containing 1.
    
  0.994
ENSCAPP00000011974
annotation not available
     
  0.947
CDH1
Cadherin 1.
     
 0.947
GRB2
Growth factor receptor bound protein 2.
     
 0.945
ENSCAPP00000013675
annotation not available
    
 0.944
SLC6A3
Solute carrier family 6 member 3.
    
 0.943
COPS6
COP9 signalosome subunit 6.
    
  0.943
COPS8
COP9 signalosome subunit 8.
     
  0.941
COPS7A
COP9 signalosome subunit 7A.
     
  0.941
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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