Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003396annotation not available (127 aa)    
Predicted Functional Partners:
THRA
Thyroid hormone receptor alpha.
      
 0.691
SELENOO
Selenoprotein O.
      
 0.669
TXNRD1
Thioredoxin reductase 1.
      
 0.643
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
      
 0.569
SELENOI
Selenoprotein I.
      
 0.569
ENSCAPP00000018197
annotation not available
      
 0.569
THRB
Thyroid hormone receptor beta.
      
 0.568
ENSCAPP00000002434
annotation not available
      
 0.557
ENSCAPP00000018390
annotation not available
      
 0.557
TG
Thyroglobulin.
      
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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