Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RBM12RNA binding motif protein 12. (877 aa)    
Predicted Functional Partners:
GSPT1
G1 to S phase transition 1.
    
 
 0.889
ENSCAPP00000003178
annotation not available
     
  0.678
GOT2
Glutamic-oxaloacetic transaminase 2.
     
  0.678
ANLN
Anillin actin binding protein.
    
   0.622
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 
 0.600
PPEF2
Protein phosphatase with EF-hand domain 2.
      
 0.558
GOT1
Glutamic-oxaloacetic transaminase 1.
     
  0.539
HDC
Histidine decarboxylase.
     
  0.539
DDC
Dopa decarboxylase.
     
  0.539
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
     
  0.539
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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