STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A6Solute carrier family 12 member 6. (1284 aa)    
Predicted Functional Partners:
ENSCAPP00000002674
annotation not available
   
 0.610
ENSCAPP00000002965
annotation not available
   
 0.610
SLC3A1
Solute carrier family 3 member 1.
   
 0.610
KIAA0513
KIAA0513.
   
 0.610
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.610
ENSCAPP00000017451
annotation not available
   
 0.610
NUDT12
Nudix hydrolase 12.
   
  0.591
ZNF644
Zinc finger protein 644.
    
 
 0.581
EPS8
Epidermal growth factor receptor pathway substrate 8.
      
 0.550
ENSCAPP00000015664
annotation not available
      
 0.520
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.