STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H1Ring finger and CCCH-type domains 1. (908 aa)    
Predicted Functional Partners:
RC3H2
Ring finger and CCCH-type domains 2.
    
  
0.740
MYSM1
Myb like, SWIRM and MPN domains 1.
   
   0.732
ENSCAPP00000005548
annotation not available
   
 
 0.661
ENSCAPP00000012294
annotation not available
   
 
 0.661
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.652
F2
Coagulation factor II, thrombin.
    
  0.626
ENSCAPP00000007441
annotation not available
    
 
 0.622
ENSCAPP00000011394
annotation not available
    
 
 0.619
ENSCAPP00000009291
annotation not available
    
 
 0.615
ENSCAPP00000000576
annotation not available
    
   0.603
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.