Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC12A4Solute carrier family 12 member 4. (999 aa)    
Predicted Functional Partners:
SLC12A6
Solute carrier family 12 member 6.
   
   0.993
SLC12A7
Solute carrier family 12 member 7.
   
   0.880
SLC12A5
Solute carrier family 12 member 5.
   
   0.880
ENSCAPP00000006391
annotation not available
    
   0.830
STK39
Serine/threonine kinase 39.
    
 0.725
LGALS3
Galectin 3.
    
   0.622
PSKH1
Protein serine kinase H1.
    
 0.612
WNK4
WNK lysine deficient protein kinase 4.
    
 
 0.585
KCTD11
Potassium channel tetramerization domain containing 11.
      
 0.569
ENSCAPP00000012085
annotation not available
      
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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