Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRACR2ACalcium release activated channel regulator 2A. (591 aa)    
Predicted Functional Partners:
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.939
RUBCN
Rubicon autophagy regulator.
    
  0.751
CALHM5
Calcium homeostasis modulator family member 5.
      
 0.743
COASY
Coenzyme A synthase.
     
 0.679
CLUAP1
Clusterin associated protein 1.
    
   0.656
STIM1
Stromal interaction molecule 1.
    
 
 0.642
ENSCAPP00000007740
annotation not available
    
 0.639
RAB14
RAB14, member RAS oncogene family.
   
 0.634
ENSCAPP00000016117
annotation not available
     
 0.631
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.625
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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