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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRACR2ACalcium release activated channel regulator 2A. (591 aa)    
Predicted Functional Partners:
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
  0.895
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.805
GDI1
GDP dissociation inhibitor 1.
   
 0.729
GDI2
GDP dissociation inhibitor 2.
   
 0.729
ENSCAPP00000001732
annotation not available
    
 0.728
C9orf72
C9orf72-SMCR8 complex subunit.
    
  0.728
RAB3IL1
RAB3A interacting protein like 1.
    
 0.728
ENSCAPP00000000178
annotation not available
    
 0.695
ENSCAPP00000017621
annotation not available
   
 0.688
EXOC7
Exocyst complex component 7.
    
 0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.