STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUSP18Dual specificity phosphatase 18. (188 aa)    
Predicted Functional Partners:
CFAP161
Cilia and flagella associated protein 161.
    
 0.850
FAM166A
Family with sequence similarity 166 member A.
   
 
 0.844
TEX43
Testis expressed 43.
    
 
 0.835
SPACA9
Sperm acrosome associated 9.
    
 
 0.816
EFCAB6
EF-hand calcium binding domain 6.
    
 
 0.815
CCDC173
Coiled-coil domain containing 173.
   
  0.815
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.812
RIBC2
RIB43A domain with coiled-coils 2.
    
 
 0.810
TEKT5
Tektin 5.
    
 
 0.806
ENSCAPP00000006888
annotation not available
    
 
 0.806
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.