Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003432annotation not available (96 aa)    
Predicted Functional Partners:
ENSCAPP00000009147
annotation not available
    
 
 0.809
PUM2
Pumilio RNA binding family member 2.
    
 
 0.809
RPP25L
Ribonuclease P/MRP subunit p25 like.
      
 0.622
PDIA6
Protein disulfide isomerase family A member 6.
      
 0.584
PLAC8L1
PLAC8 like 1.
      
 0.561
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.450
CTNS
Cystinosin, lysosomal cystine transporter.
      
 0.410
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
      
 0.410
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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