NUDT12 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NUDT12

Nudix hydrolase 12. (462 aa)

Predicted Functional Partners:

NAPRT

0.941

SIRT4

0.933

SIRT2

0.933

ENSCAPP00000013017

0.933

SIRT5

0.933

SIRT3

0.933

SIRT1

0.933

NADSYN1

0.930

NT5C1A

0.929

ACP5

0.926

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACP5	NUDT12	ENSCAPP00000005720	ENSCAPP00000003451	Acid phosphatase 5, tartrate resistant.	Nudix hydrolase 12.	0.926
ENSCAPP00000013017	NADSYN1	ENSCAPP00000013017	ENSCAPP00000000399	annotation not available	NAD synthetase 1.	0.936
ENSCAPP00000013017	NAPRT	ENSCAPP00000013017	ENSCAPP00000006863	annotation not available	Nicotinate phosphoribosyltransferase.	0.591
ENSCAPP00000013017	NUDT12	ENSCAPP00000013017	ENSCAPP00000003451	annotation not available	Nudix hydrolase 12.	0.933
ENSCAPP00000013017	SIRT1	ENSCAPP00000013017	ENSCAPP00000016572	annotation not available	Sirtuin 1.	0.966
ENSCAPP00000013017	SIRT2	ENSCAPP00000013017	ENSCAPP00000012048	annotation not available	Sirtuin 2.	0.930
ENSCAPP00000013017	SIRT3	ENSCAPP00000013017	ENSCAPP00000013646	annotation not available	Sirtuin 3.	0.930
ENSCAPP00000013017	SIRT4	ENSCAPP00000013017	ENSCAPP00000007091	annotation not available	Sirtuin 4.	0.958
ENSCAPP00000013017	SIRT5	ENSCAPP00000013017	ENSCAPP00000013450	annotation not available	Sirtuin 5.	0.962
NADSYN1	ENSCAPP00000013017	ENSCAPP00000000399	ENSCAPP00000013017	NAD synthetase 1.	annotation not available	0.936
NADSYN1	NAPRT	ENSCAPP00000000399	ENSCAPP00000006863	NAD synthetase 1.	Nicotinate phosphoribosyltransferase.	0.870
NADSYN1	NUDT12	ENSCAPP00000000399	ENSCAPP00000003451	NAD synthetase 1.	Nudix hydrolase 12.	0.930
NADSYN1	SIRT1	ENSCAPP00000000399	ENSCAPP00000016572	NAD synthetase 1.	Sirtuin 1.	0.944
NADSYN1	SIRT2	ENSCAPP00000000399	ENSCAPP00000012048	NAD synthetase 1.	Sirtuin 2.	0.936
NADSYN1	SIRT3	ENSCAPP00000000399	ENSCAPP00000013646	NAD synthetase 1.	Sirtuin 3.	0.936
NADSYN1	SIRT4	ENSCAPP00000000399	ENSCAPP00000007091	NAD synthetase 1.	Sirtuin 4.	0.936
NADSYN1	SIRT5	ENSCAPP00000000399	ENSCAPP00000013450	NAD synthetase 1.	Sirtuin 5.	0.936
NAPRT	ENSCAPP00000013017	ENSCAPP00000006863	ENSCAPP00000013017	Nicotinate phosphoribosyltransferase.	annotation not available	0.591
NAPRT	NADSYN1	ENSCAPP00000006863	ENSCAPP00000000399	Nicotinate phosphoribosyltransferase.	NAD synthetase 1.	0.870
NAPRT	NT5C1A	ENSCAPP00000006863	ENSCAPP00000012012	Nicotinate phosphoribosyltransferase.	5'-nucleotidase, cytosolic IA.	0.927