STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KMT2DLysine methyltransferase 2D. (5155 aa)    
Predicted Functional Partners:
KDM6B
Lysine demethylase 6B.
   
 0.903
ENSCAPP00000015921
annotation not available
    
 0.835
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.821
ENSCAPP00000001550
annotation not available
    
 0.774
PAXIP1
PAX interacting protein 1.
    
 0.688
ENSCAPP00000001835
annotation not available
    
 0.634
MACROH2A2
macroH2A.2 histone.
    
  0.619
MACROH2A1
macroH2A.1 histone.
    
  0.619
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.606
PRDM4
PR/SET domain 4.
    
 0.593
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.