Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SBSNSuprabasin. (457 aa)    
Predicted Functional Partners:
ACTR2
Actin related protein 2.
    
 0.753
ARPC2
Actin related protein 2/3 complex subunit 2.
   
 0.722
USO1
USO1 vesicle transport factor.
   
 0.719
WASL
WASP like actin nucleation promoting factor.
   
 0.717
WAS
WASP actin nucleation promoting factor.
   
 0.717
ENSCAPP00000009931
annotation not available
   
 0.715
ARPC3
Actin related protein 2/3 complex subunit 3.
    
 0.692
CFAP57
Cilia and flagella associated protein 57.
   
  0.691
CWH43
Cell wall biogenesis 43 C-terminal homolog.
      
 0.689
STX5
Syntaxin 5.
    
 0.686
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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