STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBPLFKBP prolyl isomerase like. (331 aa)    
Predicted Functional Partners:
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
 0.964
CSNK1D
Casein kinase 1 delta.
    
  0.911
ENSCAPP00000002506
annotation not available
  
 0.894
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
  
 0.894
ENSCAPP00000012350
annotation not available
    
   0.858
ENSCAPP00000014036
annotation not available
    
  0.847
ENSCAPP00000001930
annotation not available
   
   0.832
COG6
Component of oligomeric golgi complex 6.
    
 0.742
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.735
ENSCAPP00000004114
annotation not available
    
 0.732
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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