Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A3Solute carrier family 25 member 3. (292 aa)    
Predicted Functional Partners:
ATP5F1A
ATP synthase F1 subunit alpha.
   
 
 0.983
ATP5F1B
ATP synthase F1 subunit beta.
   
  
 0.970
VDAC2
Voltage dependent anion channel 2.
   
 
 0.932
SLC25A31
Solute carrier family 25 member 31.
   
 0.930
ATP5F1C
ATP synthase F1 subunit gamma.
   
  
 0.926
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
  
 0.916
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.900
DHX15
DEAH-box helicase 15.
   
   0.899
ENSCAPP00000012999
annotation not available
   
 
 0.893
MDH1
Malate dehydrogenase 1.
   
 
 0.861
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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