STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHACTR4Phosphatase and actin regulator 4. (500 aa)    
Predicted Functional Partners:
ENSCAPP00000000802
annotation not available
    
 
 0.588
PPP1CA
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.588
VAX2
Ventral anterior homeobox 2.
      
 0.560
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
      
 0.532
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 
 0.507
TBL2
Transducin beta like 2.
      
 0.426
LHFPL6
LHFPL tetraspan subfamily member 6.
     
 0.418
ENSCAPP00000008628
annotation not available
     
 0.416
ENSCAPP00000003504
annotation not available
     
 0.407
ENSCAPP00000002008
annotation not available
     
 0.406
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.