STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif 7. (1402 aa)    
Predicted Functional Partners:
ENSCAPP00000015526
annotation not available
    
 0.739
COL3A1
Collagen type III alpha 1 chain.
   
 0.710
B3GLCT
Beta 3-glucosyltransferase.
    
 0.666
COL4A2
Collagen type IV alpha 2 chain.
    
 0.641
SCARF1
Scavenger receptor class F member 1.
   
  
 0.619
NTN5
Netrin 5.
   
  
 0.616
ENSCAPP00000012305
annotation not available
      
 0.614
FOLR1
Folate receptor alpha.
      
 0.605
SLC30A5
Solute carrier family 30 member 5.
      
 0.605
TMEM19
Transmembrane protein 19.
      
 0.605
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.