STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A12Solute carrier family 25 member 12. (622 aa)    
Predicted Functional Partners:
SLC25A13
Solute carrier family 25 member 13.
   
  0.997
MICU2
Mitochondrial calcium uptake 2.
     
 0.967
MCU
Mitochondrial calcium uniporter.
     
 0.953
MICU3
Mitochondrial calcium uptake family member 3.
    
  0.949
MICU1
Mitochondrial calcium uptake 1.
     
 0.915
ENSCAPP00000002156
annotation not available
     
 0.904
PHB2
Prohibitin 2.
    
 
 0.880
PCCA
propionyl-CoA carboxylase subunit alpha.
    
   0.838
ENSCAPP00000011751
annotation not available
    
   0.788
TIMM8A
Translocase of inner mitochondrial membrane 8A.
     
 0.754
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.