STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003490annotation not available (133 aa)    
Predicted Functional Partners:
ENSCAPP00000011618
annotation not available
  
  
 0.958
SDSL
Serine dehydratase like.
  
  
 0.954
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.942
ENSCAPP00000018242
annotation not available
    
 0.941
PSPH
Phosphoserine phosphatase.
    
 0.931
SHMT1
Serine hydroxymethyltransferase 1.
    
 0.925
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.925
THNSL2
Threonine synthase like 2.
  
 
 0.924
CTH
Cystathionine gamma-lyase.
  
 
 0.881
ENSCAPP00000002799
annotation not available
   
 0.867
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.