STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD3methyl-CpG binding domain protein 3. (247 aa)    
Predicted Functional Partners:
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.960
MTA2
Metastasis associated 1 family member 2.
   
 0.945
MTA1
Metastasis associated 1.
   
 0.942
ENSCAPP00000005542
annotation not available
   
 0.941
HDAC1
Histone deacetylase 1.
    
 0.917
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.914
HDAC2
Histone deacetylase 2.
    
 0.905
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.868
HDAC3
Histone deacetylase 3.
    
 0.836
CHD5
Chromodomain helicase DNA binding protein 5.
    
 0.834
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.