Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003504annotation not available (66 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
    
 0.712
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
      
 0.585
WFDC1
WAP four-disulfide core domain 1.
      
 0.569
IHH
Indian hedgehog signaling molecule.
    
 0.558
ENSCAPP00000016666
annotation not available
    
 0.517
WFDC5
WAP four-disulfide core domain 5.
    
 
 0.447
ENSCAPP00000000635
annotation not available
    
 
 0.442
ADAM28
ADAM metallopeptidase domain 28.
      
 0.434
CLU
Clusterin.
    
  0.419
A2M
Alpha-2-macroglobulin.
    
 0.415
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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