STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN13Tetraspanin 13. (200 aa)    
Predicted Functional Partners:
SNX13
Sorting nexin 13.
    
 
 0.830
ANKMY2
Ankyrin repeat and MYND domain containing 2.
      
 0.681
ENSCAPP00000001964
annotation not available
      
 0.657
TSPAN17
Tetraspanin 17.
      
 0.578
MST1R
Macrophage stimulating 1 receptor.
    
 0.572
BZW2
Basic leucine zipper and W2 domains 2.
      
 0.568
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.561
BZW1
Basic leucine zipper and W2 domains 1.
      
 0.544
FRMD7
FERM domain containing 7.
      
 0.532
PHF20L1
PHD finger protein 20 like 1.
     
 0.528
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.