STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7orf31Chromosome 7 open reading frame 31. (460 aa)    
Predicted Functional Partners:
TEKT3
Tektin 3.
   
   0.926
TEKT5
Tektin 5.
   
   0.925
EFCAB6
EF-hand calcium binding domain 6.
   
   0.904
C11orf1
Chromosome 11 open reading frame 1.
   
   0.896
ODF3
Outer dense fiber of sperm tails 3.
   
   0.877
CFAP45
Cilia and flagella associated protein 45.
    
   0.872
C1orf100
Chromosome 1 open reading frame 100.
    
   0.872
KLHL40
Kelch like family member 40.
    
   0.853
FAM166A
Family with sequence similarity 166 member A.
   
   0.842
PPIF
Peptidylprolyl isomerase F.
   
 
  0.842
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.