TTL protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TTL

Tubulin tyrosine ligase. (233 aa)

Predicted Functional Partners:

TUBA4A

0.939

VASH1

0.885

ENSCAPP00000000451

0.882

STMN4

0.825

LRRC49

0.825

ENSCAPP00000016121

0.824

ENSCAPP00000016466

0.820

TUBB1

0.748

ENSCAPP00000001394

0.748

TUBB4A

0.748

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000451	TTL	ENSCAPP00000000451	ENSCAPP00000003537	annotation not available	Tubulin tyrosine ligase.	0.882
ENSCAPP00000001394	STMN4	ENSCAPP00000001394	ENSCAPP00000000435	annotation not available	Stathmin 4.	0.593
ENSCAPP00000001394	TTL	ENSCAPP00000001394	ENSCAPP00000003537	annotation not available	Tubulin tyrosine ligase.	0.748
ENSCAPP00000001394	TUBA4A	ENSCAPP00000001394	ENSCAPP00000017321	annotation not available	Tubulin alpha 4a.	0.981
ENSCAPP00000001394	TUBB1	ENSCAPP00000001394	ENSCAPP00000000296	annotation not available	Tubulin beta 1 class VI.	0.515
ENSCAPP00000016121	ENSCAPP00000016466	ENSCAPP00000016121	ENSCAPP00000016466	annotation not available	annotation not available	0.985
ENSCAPP00000016121	LRRC49	ENSCAPP00000016121	ENSCAPP00000016437	annotation not available	Leucine rich repeat containing 49.	0.984
ENSCAPP00000016121	TTL	ENSCAPP00000016121	ENSCAPP00000003537	annotation not available	Tubulin tyrosine ligase.	0.824
ENSCAPP00000016466	ENSCAPP00000016121	ENSCAPP00000016466	ENSCAPP00000016121	annotation not available	annotation not available	0.985
ENSCAPP00000016466	LRRC49	ENSCAPP00000016466	ENSCAPP00000016437	annotation not available	Leucine rich repeat containing 49.	0.985
ENSCAPP00000016466	TTL	ENSCAPP00000016466	ENSCAPP00000003537	annotation not available	Tubulin tyrosine ligase.	0.820
LRRC49	ENSCAPP00000016121	ENSCAPP00000016437	ENSCAPP00000016121	Leucine rich repeat containing 49.	annotation not available	0.984
LRRC49	ENSCAPP00000016466	ENSCAPP00000016437	ENSCAPP00000016466	Leucine rich repeat containing 49.	annotation not available	0.985
LRRC49	TTL	ENSCAPP00000016437	ENSCAPP00000003537	Leucine rich repeat containing 49.	Tubulin tyrosine ligase.	0.825
STMN4	ENSCAPP00000001394	ENSCAPP00000000435	ENSCAPP00000001394	Stathmin 4.	annotation not available	0.593
STMN4	TTL	ENSCAPP00000000435	ENSCAPP00000003537	Stathmin 4.	Tubulin tyrosine ligase.	0.825
STMN4	TUBA4A	ENSCAPP00000000435	ENSCAPP00000017321	Stathmin 4.	Tubulin alpha 4a.	0.908
STMN4	TUBB1	ENSCAPP00000000435	ENSCAPP00000000296	Stathmin 4.	Tubulin beta 1 class VI.	0.593
STMN4	TUBB4A	ENSCAPP00000000435	ENSCAPP00000005109	Stathmin 4.	Tubulin beta 4A class IVa.	0.593
TTL	ENSCAPP00000000451	ENSCAPP00000003537	ENSCAPP00000000451	Tubulin tyrosine ligase.	annotation not available	0.882