Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RANGAP1Ran GTPase activating protein 1. (585 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.999
SUMO1
Small ubiquitin like modifier 1.
    
 0.996
RCC1
Regulator of chromosome condensation 1.
   
 0.994
ENSCAPP00000013457
annotation not available
    
 0.988
NUP107
Nucleoporin 107.
   
 0.987
ENSCAPP00000003757
annotation not available
   
 0.987
ENSCAPP00000013042
annotation not available
    
 
 0.983
SENP2
SUMO specific peptidase 2.
    
 
 0.975
ENSCAPP00000005086
annotation not available
   
 0.966
ENSCAPP00000018461
annotation not available
   
 0.966
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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