STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTTIP1Deoxynucleotidyltransferase terminal interacting protein 1. (222 aa)    
Predicted Functional Partners:
TRERF1
Transcriptional regulating factor 1.
    
 
 0.994
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
 0.989
HDAC1
Histone deacetylase 1.
    
 
 0.962
ZNF541
Zinc finger protein 541.
    
 
 0.942
ZMYM2
Zinc finger MYM-type containing 2.
     
 0.924
SNUPN
Snurportin 1.
     
 0.914
KDM1A
Lysine demethylase 1A.
     
 0.908
HDAC2
Histone deacetylase 2.
    
 
 0.867
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.662
ZMYM3
Zinc finger MYM-type containing 3.
     
 0.652
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.