Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAT2Adenosine deaminase tRNA specific 2. (168 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.866
TK1
Thymidine kinase 1.
    
 0.774
RBKS
Ribokinase.
    
 0.771
ADAT1
Adenosine deaminase tRNA specific 1.
      
 0.756
NT5E
5'-nucleotidase ecto.
    
 0.742
RPUSD1
RNA pseudouridine synthase domain containing 1.
   
 0.731
RPUSD3
RNA pseudouridine synthase D3.
   
 0.723
ENSCAPP00000004325
annotation not available
   
 0.718
RPUSD4
RNA pseudouridine synthase D4.
   
 0.714
DOLK
Dolichol kinase.
   
 
 0.708
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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