STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YBX1Y-box binding protein 1. (268 aa)    
Predicted Functional Partners:
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.997
DHX9
DExH-box helicase 9.
   
 0.996
YBX3
Y-box binding protein 3.
   
   0.995
CSDE1
Cold shock domain containing E1.
   
 0.993
HNRNPAB
Heterogeneous nuclear ribonucleoprotein A/B.
   
 0.992
ENSCAPP00000017678
annotation not available
   
 0.992
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
   
 0.991
RPL6
Ribosomal protein L6.
   
   0.989
IGF2BP1
Insulin like growth factor 2 mRNA binding protein 1.
   
 0.987
YBX2
Y-box binding protein 2.
   
   0.984
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.