TRIM21 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

TRIM21

Tripartite motif containing 21. (430 aa)

Predicted Functional Partners:

RO60

0.951

SQSTM1

0.947

DDX41

0.935

ENSCAPP00000008952

0.872

ENSCAPP00000008313

0.851

ENSCAPP00000001012

0.843

GMPS

0.831

ISG15

0.815

ELAVL1

0.814

MAVS

0.814

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	ENSCAPP00000008952	ENSCAPP00000010043	ENSCAPP00000008952	DEAD-box helicase 41.	annotation not available	0.839
DDX41	MAVS	ENSCAPP00000010043	ENSCAPP00000012629	DEAD-box helicase 41.	Mitochondrial antiviral signaling protein.	0.454
DDX41	TRIM21	ENSCAPP00000010043	ENSCAPP00000003560	DEAD-box helicase 41.	Tripartite motif containing 21.	0.935
ELAVL1	TRIM21	ENSCAPP00000006967	ENSCAPP00000003560	ELAV like RNA binding protein 1.	Tripartite motif containing 21.	0.814
ENSCAPP00000001012	ISG15	ENSCAPP00000001012	ENSCAPP00000004942	annotation not available	ISG15 ubiquitin like modifier.	0.475
ENSCAPP00000001012	TRIM21	ENSCAPP00000001012	ENSCAPP00000003560	annotation not available	Tripartite motif containing 21.	0.843
ENSCAPP00000008313	ENSCAPP00000008952	ENSCAPP00000008313	ENSCAPP00000008952	annotation not available	annotation not available	0.989
ENSCAPP00000008313	ISG15	ENSCAPP00000008313	ENSCAPP00000004942	annotation not available	ISG15 ubiquitin like modifier.	0.968
ENSCAPP00000008313	MAVS	ENSCAPP00000008313	ENSCAPP00000012629	annotation not available	Mitochondrial antiviral signaling protein.	0.780
ENSCAPP00000008313	TRIM21	ENSCAPP00000008313	ENSCAPP00000003560	annotation not available	Tripartite motif containing 21.	0.851
ENSCAPP00000008952	DDX41	ENSCAPP00000008952	ENSCAPP00000010043	annotation not available	DEAD-box helicase 41.	0.839
ENSCAPP00000008952	ENSCAPP00000008313	ENSCAPP00000008952	ENSCAPP00000008313	annotation not available	annotation not available	0.989
ENSCAPP00000008952	ISG15	ENSCAPP00000008952	ENSCAPP00000004942	annotation not available	ISG15 ubiquitin like modifier.	0.982
ENSCAPP00000008952	MAVS	ENSCAPP00000008952	ENSCAPP00000012629	annotation not available	Mitochondrial antiviral signaling protein.	0.994
ENSCAPP00000008952	SQSTM1	ENSCAPP00000008952	ENSCAPP00000012680	annotation not available	Sequestosome 1.	0.961
ENSCAPP00000008952	TRIM21	ENSCAPP00000008952	ENSCAPP00000003560	annotation not available	Tripartite motif containing 21.	0.872
GMPS	TRIM21	ENSCAPP00000006481	ENSCAPP00000003560	Guanine monophosphate synthase.	Tripartite motif containing 21.	0.831
ISG15	ENSCAPP00000001012	ENSCAPP00000004942	ENSCAPP00000001012	ISG15 ubiquitin like modifier.	annotation not available	0.475
ISG15	ENSCAPP00000008313	ENSCAPP00000004942	ENSCAPP00000008313	ISG15 ubiquitin like modifier.	annotation not available	0.968
ISG15	ENSCAPP00000008952	ENSCAPP00000004942	ENSCAPP00000008952	ISG15 ubiquitin like modifier.	annotation not available	0.982