TAL1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

TAL1

TAL bHLH transcription factor 1, erythroid differentiation factor. (180 aa)

Predicted Functional Partners:

LMO2

0.989

LDB1

0.984

TCF3

0.955

LDB2

0.951

ENSCAPP00000011786

0.938

TCF4

0.938

GATA1

0.917

GATA3

0.905

SPI1

0.807

LMO1

0.790

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000011786	GATA1	ENSCAPP00000011786	ENSCAPP00000018244	annotation not available	GATA binding protein 1.	0.542
ENSCAPP00000011786	GATA3	ENSCAPP00000011786	ENSCAPP00000002419	annotation not available	GATA binding protein 3.	0.603
ENSCAPP00000011786	LDB1	ENSCAPP00000011786	ENSCAPP00000007918	annotation not available	LIM domain binding 1.	0.914
ENSCAPP00000011786	LDB2	ENSCAPP00000011786	ENSCAPP00000007810	annotation not available	LIM domain binding 2.	0.721
ENSCAPP00000011786	LMO1	ENSCAPP00000011786	ENSCAPP00000000362	annotation not available	LIM domain only 1.	0.657
ENSCAPP00000011786	LMO2	ENSCAPP00000011786	ENSCAPP00000003568	annotation not available	LIM domain only 2.	0.831
ENSCAPP00000011786	TAL1	ENSCAPP00000011786	ENSCAPP00000003564	annotation not available	TAL bHLH transcription factor 1, erythroid differentiation factor.	0.938
ENSCAPP00000011786	TCF3	ENSCAPP00000011786	ENSCAPP00000002686	annotation not available	Transcription factor 3.	0.633
GATA1	ENSCAPP00000011786	ENSCAPP00000018244	ENSCAPP00000011786	GATA binding protein 1.	annotation not available	0.542
GATA1	GATA3	ENSCAPP00000018244	ENSCAPP00000002419	GATA binding protein 1.	GATA binding protein 3.	0.693
GATA1	LDB1	ENSCAPP00000018244	ENSCAPP00000007918	GATA binding protein 1.	LIM domain binding 1.	0.829
GATA1	LDB2	ENSCAPP00000018244	ENSCAPP00000007810	GATA binding protein 1.	LIM domain binding 2.	0.829
GATA1	LMO1	ENSCAPP00000018244	ENSCAPP00000000362	GATA binding protein 1.	LIM domain only 1.	0.695
GATA1	LMO2	ENSCAPP00000018244	ENSCAPP00000003568	GATA binding protein 1.	LIM domain only 2.	0.979
GATA1	SPI1	ENSCAPP00000018244	ENSCAPP00000008755	GATA binding protein 1.	Spi-1 proto-oncogene.	0.790
GATA1	TAL1	ENSCAPP00000018244	ENSCAPP00000003564	GATA binding protein 1.	TAL bHLH transcription factor 1, erythroid differentiation factor.	0.917
GATA1	TCF3	ENSCAPP00000018244	ENSCAPP00000002686	GATA binding protein 1.	Transcription factor 3.	0.760
GATA1	TCF4	ENSCAPP00000018244	ENSCAPP00000015336	GATA binding protein 1.	Transcription factor 4.	0.542
GATA3	ENSCAPP00000011786	ENSCAPP00000002419	ENSCAPP00000011786	GATA binding protein 3.	annotation not available	0.603
GATA3	GATA1	ENSCAPP00000002419	ENSCAPP00000018244	GATA binding protein 3.	GATA binding protein 1.	0.693