Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALML3Calmodulin like 3. (149 aa)    
Predicted Functional Partners:
ENSCAPP00000004076
annotation not available
    
 0.984
RYR2
Ryanodine receptor 2.
    
 0.976
PHKB
Phosphorylase kinase regulatory subunit beta.
    
 0.968
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
    
 0.967
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
    
 0.967
NOS3
Nitric oxide synthase 3.
    
 0.967
MYH14
Myosin heavy chain 14.
    
 0.965
CAMKK2
Calcium/calmodulin dependent protein kinase kinase 2.
    
 0.962
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
    
 0.961
CETN1
Centrin 1.
    
 0.961
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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