Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBCCD1TBCC domain containing 1. (501 aa)    
Predicted Functional Partners:
PPP2R3A
Protein phosphatase 2 regulatory subunit B''alpha.
    
 
 0.939
ENSCAPP00000010410
annotation not available
      
 0.918
GINS1
GINS complex subunit 1.
      
 0.890
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.874
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.847
GFOD2
Glucose-fructose oxidoreductase domain containing 2.
      
 0.844
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
 
 0.838
TLK2
Tousled like kinase 2.
      
 0.826
BVES
Blood vessel epicardial substance.
      
 0.797
GPR153
G protein-coupled receptor 153.
      
 0.754
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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