Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBH1F-box DNA helicase 1. (859 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
    
 0.989
CUL1
Cullin 1.
    
 0.987
TOP3A
DNA topoisomerase III alpha.
  
 0.984
SKP1
S-phase kinase associated protein 1.
    
 0.983
RAD51
RAD51 recombinase.
  
 
 0.967
PCNA
Proliferating cell nuclear antigen.
  
 0.964
WRN
WRN RecQ like helicase.
  
 0.953
XRCC3
X-ray repair cross complementing 3.
  
 
 0.951
RAD52
RAD52 homolog, DNA repair protein.
    
 
 0.927
RECQL4
RecQ like helicase 4.
  
 0.925
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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