STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003575annotation not available (584 aa)    
Predicted Functional Partners:
CASC1
Cancer susceptibility 1.
   
    0.673
CCDC62
Coiled-coil domain containing 62.
      
 0.562
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.559
SPATA16
Spermatogenesis associated 16.
      
 0.553
ZPBP
Zona pellucida binding protein.
   
  
 0.507
ENSCAPP00000006545
annotation not available
      
 0.459
SPATA46
Spermatogenesis associated 46.
      
 0.431
AGFG1
ArfGAP with FG repeats 1.
      
 0.418
SPATA3
Spermatogenesis associated 3.
      
 0.412
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.