Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C11orf49Chromosome 11 open reading frame 49. (329 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 
 0.981
TTLL1
Tubulin tyrosine ligase like 1.
    
 
 0.975
TBC1D19
TBC1 domain family member 19.
   
   0.961
ENSCAPP00000016121
annotation not available
    
   0.959
ENSCAPP00000016466
annotation not available
    
   0.959
ENSCAPP00000000819
annotation not available
    
   0.926
ENSCAPP00000011453
annotation not available
    
   0.926
RAB29
RAB29, member RAS oncogene family.
    
   0.851
TTL
Tubulin tyrosine ligase.
    
 
 0.712
ENSCAPP00000008904
annotation not available
      
 0.689
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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