STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf49Chromosome 11 open reading frame 49. (329 aa)    
Predicted Functional Partners:
ENSCAPP00000016466
annotation not available
    
   0.768
LRRC49
Leucine rich repeat containing 49.
    
 
 0.766
TTLL1
Tubulin tyrosine ligase like 1.
    
 
 0.745
ENSCAPP00000016121
annotation not available
    
   0.702
ENSCAPP00000008904
annotation not available
      
 0.562
TTL
Tubulin tyrosine ligase.
    
   0.544
TBC1D19
TBC1 domain family member 19.
   
   0.479
RAB29
RAB29, member RAS oncogene family.
    
   0.444
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.437
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.