STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Yip1 domain family member 1. (268 aa)    
Predicted Functional Partners:
YIPF4
Yip1 domain family member 4.
    
 
 0.778
YIPF5
Yip1 domain family member 5.
   
 
 0.683
SELENOS
Selenoprotein S.
    
 
 0.658
TVP23B
Trans-golgi network vesicle protein 23 homolog B.
   
 
 0.639
TVP23A
Trans-golgi network vesicle protein 23 homolog A.
   
 
 0.639
FBXO32
F-box protein 32.
      
 0.559
TRIM63
Tripartite motif containing 63.
      
 0.523
YIPF3
Yip1 domain family member 3.
   
  
 0.479
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.463
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.