STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YIPF1Yip1 domain family member 1. (268 aa)    
Predicted Functional Partners:
YIPF4
Yip1 domain family member 4.
    
 
 0.858
YIPF5
Yip1 domain family member 5.
   
 
 0.813
FBXO32
F-box protein 32.
      
 0.812
SELENOS
Selenoprotein S.
    
 
 0.738
TVP23B
Trans-golgi network vesicle protein 23 homolog B.
   
 
 0.729
TVP23A
Trans-golgi network vesicle protein 23 homolog A.
   
 
 0.729
TRIM63
Tripartite motif containing 63.
      
 0.686
ENSCAPP00000001689
annotation not available
    
 
 0.660
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
   
  
 0.635
YIPF3
Yip1 domain family member 3.
   
  
 0.598
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.