STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003581annotation not available (183 aa)    
Predicted Functional Partners:
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
 
 0.872
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 
 0.864
TAPBPL
TAP binding protein like.
     
  0.861
ENSCAPP00000015634
annotation not available
     
  0.861
PDIA3
Protein disulfide isomerase family A member 3.
     
  0.859
PDIA4
Protein disulfide isomerase family A member 4.
     
  0.846
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
     
  0.846
AP1G2
Adaptor related protein complex 1 subunit gamma 2.
     
  0.846
AP2B1
Adaptor related protein complex 2 subunit beta 1.
     
  0.845
AP1B1
Adaptor related protein complex 1 subunit beta 1.
     
  0.845
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.