STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003581annotation not available (183 aa)    
Predicted Functional Partners:
HLA-DOA
Major histocompatibility complex, class II, DO alpha.
   
 
  0.849
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
   
 
 0.847
ENSCAPP00000011583
annotation not available
    
   0.843
HLA-DPA1
Major histocompatibility complex, class II, DP alpha 1.
   
 
0.828
ENSCAPP00000017938
annotation not available
   
 
 
0.823
ENSCAPP00000000699
annotation not available
    
  0.774
ENSCAPP00000003382
annotation not available
    
  0.774
ENSCAPP00000007308
annotation not available
    
  0.774
ENSCAPP00000010570
annotation not available
    
  0.774
ENSCAPP00000011773
annotation not available
    
  0.774
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.