Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF152Ring finger protein 152. (203 aa)    
Predicted Functional Partners:
ENSCAPP00000017310
annotation not available
    
 0.847
INTS5
Integrator complex subunit 5.
      
 0.826
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
      
 0.801
IRAK1
Interleukin 1 receptor associated kinase 1.
    
   0.785
ENSCAPP00000003668
annotation not available
      
 0.746
GET4
Guided entry of tail-anchored proteins factor 4.
      
 0.686
PAQR9
Progestin and adipoQ receptor family member 9.
      
 0.680
RNF8
Ring finger protein 8.
    
 0.637
SRSF12
Serine and arginine rich splicing factor 12.
    
 
 0.602
ENSCAPP00000000492
annotation not available
    
  0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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