FAM13C protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FAM13C

Family with sequence similarity 13 member C. (521 aa)

Predicted Functional Partners:

AHCYL1

0.904

ENSCAPP00000009270

0.897

RDH13

0.876

PPP2R3A

0.785

UMODL1

0.692

ENSCAPP00000003951

0.669

ENSCAPP00000002366

0.579

SDAD1

0.572

ENSCAPP00000013549

0.572

ENSCAPP00000013533

0.555

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHCYL1	FAM13C	ENSCAPP00000004494	ENSCAPP00000003588	Adenosylhomocysteinase like 1.	Family with sequence similarity 13 member C.	0.904
ENSCAPP00000002366	FAM13C	ENSCAPP00000002366	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.579
ENSCAPP00000002366	UMODL1	ENSCAPP00000002366	ENSCAPP00000011398	annotation not available	Uromodulin like 1.	0.568
ENSCAPP00000003951	FAM13C	ENSCAPP00000003951	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.669
ENSCAPP00000009270	FAM13C	ENSCAPP00000009270	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.897
ENSCAPP00000009270	RDH13	ENSCAPP00000009270	ENSCAPP00000015865	annotation not available	Retinol dehydrogenase 13.	0.603
ENSCAPP00000013533	FAM13C	ENSCAPP00000013533	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.555
ENSCAPP00000013549	FAM13C	ENSCAPP00000013549	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.572
ENSCAPP00000013549	UMODL1	ENSCAPP00000013549	ENSCAPP00000011398	annotation not available	Uromodulin like 1.	0.532
FAM13C	AHCYL1	ENSCAPP00000003588	ENSCAPP00000004494	Family with sequence similarity 13 member C.	Adenosylhomocysteinase like 1.	0.904
FAM13C	ENSCAPP00000002366	ENSCAPP00000003588	ENSCAPP00000002366	Family with sequence similarity 13 member C.	annotation not available	0.579
FAM13C	ENSCAPP00000003951	ENSCAPP00000003588	ENSCAPP00000003951	Family with sequence similarity 13 member C.	annotation not available	0.669
FAM13C	ENSCAPP00000009270	ENSCAPP00000003588	ENSCAPP00000009270	Family with sequence similarity 13 member C.	annotation not available	0.897
FAM13C	ENSCAPP00000013533	ENSCAPP00000003588	ENSCAPP00000013533	Family with sequence similarity 13 member C.	annotation not available	0.555
FAM13C	ENSCAPP00000013549	ENSCAPP00000003588	ENSCAPP00000013549	Family with sequence similarity 13 member C.	annotation not available	0.572
FAM13C	PPP2R3A	ENSCAPP00000003588	ENSCAPP00000017156	Family with sequence similarity 13 member C.	Protein phosphatase 2 regulatory subunit B''alpha.	0.785
FAM13C	RDH13	ENSCAPP00000003588	ENSCAPP00000015865	Family with sequence similarity 13 member C.	Retinol dehydrogenase 13.	0.876
FAM13C	SDAD1	ENSCAPP00000003588	ENSCAPP00000007088	Family with sequence similarity 13 member C.	SDA1 domain containing 1.	0.572
FAM13C	UMODL1	ENSCAPP00000003588	ENSCAPP00000011398	Family with sequence similarity 13 member C.	Uromodulin like 1.	0.692
PPP2R3A	FAM13C	ENSCAPP00000017156	ENSCAPP00000003588	Protein phosphatase 2 regulatory subunit B''alpha.	Family with sequence similarity 13 member C.	0.785