FAM13C protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FAM13C

Family with sequence similarity 13 member C. (521 aa)

Predicted Functional Partners:

ENSCAPP00000009270

0.575

RDH13

0.564

PPP2R3A

0.551

UMODL1

0.546

ENSCAPP00000009712

0.495

ENSCAPP00000013934

0.495

RND1

0.486

ENSCAPP00000006439

0.486

ENSCAPP00000006795

0.486

ENSCAPP00000012909

0.486

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000006439	ENSCAPP00000006795	ENSCAPP00000006439	ENSCAPP00000006795	annotation not available	annotation not available	0.586
ENSCAPP00000006439	ENSCAPP00000009712	ENSCAPP00000006439	ENSCAPP00000009712	annotation not available	annotation not available	0.791
ENSCAPP00000006439	ENSCAPP00000013934	ENSCAPP00000006439	ENSCAPP00000013934	annotation not available	annotation not available	0.794
ENSCAPP00000006439	FAM13C	ENSCAPP00000006439	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.486
ENSCAPP00000006439	RND1	ENSCAPP00000006439	ENSCAPP00000002218	annotation not available	Rho family GTPase 1.	0.695
ENSCAPP00000006795	ENSCAPP00000006439	ENSCAPP00000006795	ENSCAPP00000006439	annotation not available	annotation not available	0.586
ENSCAPP00000006795	ENSCAPP00000009712	ENSCAPP00000006795	ENSCAPP00000009712	annotation not available	annotation not available	0.673
ENSCAPP00000006795	ENSCAPP00000012909	ENSCAPP00000006795	ENSCAPP00000012909	annotation not available	annotation not available	0.587
ENSCAPP00000006795	ENSCAPP00000013934	ENSCAPP00000006795	ENSCAPP00000013934	annotation not available	annotation not available	0.673
ENSCAPP00000006795	FAM13C	ENSCAPP00000006795	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.486
ENSCAPP00000009270	FAM13C	ENSCAPP00000009270	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.575
ENSCAPP00000009270	RDH13	ENSCAPP00000009270	ENSCAPP00000015865	annotation not available	Retinol dehydrogenase 13.	0.432
ENSCAPP00000009712	ENSCAPP00000006439	ENSCAPP00000009712	ENSCAPP00000006439	annotation not available	annotation not available	0.791
ENSCAPP00000009712	ENSCAPP00000006795	ENSCAPP00000009712	ENSCAPP00000006795	annotation not available	annotation not available	0.673
ENSCAPP00000009712	ENSCAPP00000012909	ENSCAPP00000009712	ENSCAPP00000012909	annotation not available	annotation not available	0.945
ENSCAPP00000009712	FAM13C	ENSCAPP00000009712	ENSCAPP00000003588	annotation not available	Family with sequence similarity 13 member C.	0.495
ENSCAPP00000009712	RND1	ENSCAPP00000009712	ENSCAPP00000002218	annotation not available	Rho family GTPase 1.	0.696
ENSCAPP00000012909	ENSCAPP00000006795	ENSCAPP00000012909	ENSCAPP00000006795	annotation not available	annotation not available	0.587
ENSCAPP00000012909	ENSCAPP00000009712	ENSCAPP00000012909	ENSCAPP00000009712	annotation not available	annotation not available	0.945
ENSCAPP00000012909	ENSCAPP00000013934	ENSCAPP00000012909	ENSCAPP00000013934	annotation not available	annotation not available	0.952