STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003595annotation not available (419 aa)    
Predicted Functional Partners:
TADA1
Transcriptional adaptor 1.
    
  0.933
ENSCAPP00000016271
annotation not available
   
 
 0.930
TAF12
TATA-box binding protein associated factor 12.
    
 0.917
ENSCAPP00000007994
annotation not available
     
 0.909
VARS1
valyl-tRNA synthetase 1.
  
 
 0.871
METTL1
Methyltransferase like 1.
   
 0.865
TADA3
Transcriptional adaptor 3.
    
 0.865
TAF9
TATA-box binding protein associated factor 9.
    
 0.863
ENSCAPP00000007075
annotation not available
    
 0.856
YARS1
tyrosyl-tRNA synthetase 1.
  
  
 0.849
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.