Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000003595annotation not available (419 aa)    
Predicted Functional Partners:
ENSCAPP00000007994
annotation not available
     
 0.975
SARS1
seryl-tRNA synthetase 1.
     
  0.911
YARS1
tyrosyl-tRNA synthetase 1.
  
  
 0.909
KCMF1
Potassium channel modulatory factor 1.
    
   0.900
SECISBP2
SECIS binding protein 2.
     
 0.854
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.847
TAF9
TATA-box binding protein associated factor 9.
    
 0.834
IL17RD
Interleukin 17 receptor D.
     
  0.831
PPT2
Palmitoyl-protein thioesterase 2.
   
   0.830
TADA3
Transcriptional adaptor 3.
    
 0.821
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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