Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR84G protein-coupled receptor 84. (396 aa)    
Predicted Functional Partners:
HIVEP3
HIVEP zinc finger 3.
    
 
 0.949
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
      
 0.949
TET2
Tet methylcytosine dioxygenase 2.
      
 0.949
ENSCAPP00000000270
annotation not available
      
 0.939
USH1C
USH1 protein network component harmonin.
    
 
 0.910
ENSCAPP00000013531
annotation not available
      
 0.891
KIF1B
Kinesin family member 1B.
      
 0.873
GNAI3
G protein subunit alpha i3.
    
  0.866
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
    
 
 0.859
SALL4
Spalt like transcription factor 4.
      
 0.844
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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