Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYN3Synapsin III. (560 aa)    
Predicted Functional Partners:
ENSCAPP00000002337
annotation not available
   
  0.904
SYN1
Synapsin I.
   
  0.904
SNAP25
Synaptosome associated protein 25.
   
 0.895
DUSP2
Dual specificity phosphatase 2.
    
   0.861
ENSCAPP00000005959
annotation not available
   
 0.861
SYT1
Synaptotagmin 1.
   
 0.814
VAMP3
Vesicle associated membrane protein 3.
    
 0.805
CPLX2
Complexin 2.
   
 
 0.780
SNAP47
Synaptosome associated protein 47.
   
 0.777
SNAP23
Synaptosome associated protein 23.
   
 0.777
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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