STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE3Signal peptide, CUB domain and EGF like domain containing 3. (974 aa)    
Predicted Functional Partners:
ENSCAPP00000000270
annotation not available
    
 0.764
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.753
ENSCAPP00000017228
annotation not available
   
 0.682
TGFBR2
Transforming growth factor beta receptor 2.
   
 0.665
ENSCAPP00000006586
annotation not available
    
 0.664
ENSCAPP00000013350
annotation not available
    
 0.664
MMP2
Matrix metallopeptidase 2.
    
 0.661
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.659
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.659
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.636
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.