STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A38Solute carrier family 25 member 38. (269 aa)    
Predicted Functional Partners:
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
    
 
 0.767
SFXN1
Sideroflexin 1.
      
 0.738
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
      
 0.690
ENSCAPP00000002837
annotation not available
      
 0.663
UROS
Uroporphyrinogen III synthase.
   
  
 0.642
PUS1
Pseudouridine synthase 1.
      
 0.633
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.622
TMEM14C
Transmembrane protein 14C.
      
 0.617
FECH
Ferrochelatase.
      
 0.616
ENSCAPP00000014634
annotation not available
    
 
 0.614
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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