STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEIL3Nei like DNA glycosylase 3. (525 aa)    
Predicted Functional Partners:
ENSCAPP00000000297
annotation not available
     
 0.991
NEIL2
Nei like DNA glycosylase 2.
     
 0.917
ENSCAPP00000012091
annotation not available
  
  
 0.792
TRAIP
TRAF interacting protein.
   
  
 0.784
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
     
 0.756
FEN1
Flap structure-specific endonuclease 1.
  
  
 0.754
FANCI
FA complementation group I.
   
  
 0.705
FANCD2
FA complementation group D2.
   
  
 0.698
TOP2A
DNA topoisomerase II alpha.
  
  
 0.694
MLH3
mutL homolog 3.
     
 0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.