STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEIL3Nei like DNA glycosylase 3. (525 aa)    
Predicted Functional Partners:
COASY
Coenzyme A synthase.
  
  
 0.861
DCAKD
dephospho-CoA kinase domain containing.
  
  
 0.861
NTHL1
Nth like DNA glycosylase 1.
  
  
 0.858
ENSCAPP00000008966
annotation not available
  
  
 0.858
POLG
DNA polymerase gamma, catalytic subunit.
  
  
 0.858
FEN1
Flap structure-specific endonuclease 1.
  
  
 0.773
TOP2A
DNA topoisomerase II alpha.
  
  
 0.672
TTK
TTK protein kinase.
   
    0.670
ENSCAPP00000012091
annotation not available
  
  
 0.668
SRPRA
SRP receptor subunit alpha.
  
  
 0.662
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.